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Ken leads the development and maintenance of analytical tools and user interface components for the IMG family of systems. …

… of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This … includes engineering of non-model yeasts for production of biofuels and renewable chemicals, developing genome … Enables Fast CO2-Fixation by Reductive Carboxylases., ACS Central Science , 2022 Macdonald et al., A Synthetic Gene …

All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance, proposed data … the applicant/community, and track record of the applicant. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There …

Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and … published January 27, is about engineering plants and their microbiomes for more sustainable agriculture and was written … and metagenome , rather than just by 16S ribosomal RNA gene censuses.  Emiley Eloe-Fadrosh ,  Metagenome Program lead, …

… world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for … scale sustainable sugarcane conversion technologies for  biofuels and other bioproducts. Finally, understanding how … science agency CSIRO, the French Agricultural Research Centre for International Development (CIRAD), and the U.S. …

… provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the journal  Environmental Microbiome . “Before JGI was involved, I was not sure we could even complete … sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley Eloe-Fadrosh , …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … Team    … Nayfach S et al.  A Genomic Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, … Eloe-Fadrosh, Emiley A. et al. (2016)  Metagenomics uncovers gaps in amplicon-based detection of microbial …

… living near hydrothermal deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are … in such extreme conditions. They identified 511 new or recently discovered genera of bacteria and archaea. Many of … are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published in the  …

… the ability to break down hardy plant cell walls and therefore hold clues to how humans could do the same on an industrial scale to produce biofuels . Since one of the challenges of developing … process tough cell walls.  “The JGI was really leading the development of these approaches that are still vital to …