Results

Earth BioGenome Project: Sequencing life for the future of life
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium hybridum . …
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David Goodstein
… gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic … genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors. Nature …
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Sequencing Submission Requirements for DNA Synthesis
… include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … How To Create an Annotated GenBank File …
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Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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Use of Agrobacterium rhizogenes Strain 18r12v and Paromomycin Selection for Transformation of Brachypodium distachyon and Brachypodium sylvaticum
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Brachypodium as an emerging model for cereal–pathogen interactions
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User Support Analysis Group
The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work …
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Recreating Stable Brachypodium hybridum Allotetraploids by Uniting the Divergent Genomes of B. distachyon and B. stacei
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Genome diversity in Brachypodium distachyon: deep sequencing of highly diverse inbred lines
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The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum
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