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Examples: Successful LOIs & Submissions
Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared …
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N-dependent dynamics of root growth and nitrate and ammonium uptake are altered by the bacterium Herbaspirillum seropedicae in the cereal model Brachypodium distachyon
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Correlation-based network analysis combined with machine learning techniques highlight the role of the GABA shunt in Brachypodium sylvaticum freezing tolerance
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest … darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using traditional approaches. …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the … and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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The CC–NB–LRR protein BSR1 from Brachypodium confers resistance to Barley stripe mosaic virus in gramineous plants by recognising TGB1 movement protein
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an … DOE RENEW initiative, undergraduate student Ti’Yanna Watson and graduate student LaMonika Dent worked with JGI … Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant …
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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed … Nature Biotechnology 30: 555-561. The International Brachypodium Initiative. Genome sequencing and analysis of …
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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