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JGI@25: Following Fungi that Pry Apart Plant Polymers
… and environmental challenges.   Usually, plants have the upper hand against any kind of biomass breakdown. They’ve … of tough plants. Thanks to gut microbes — namely, anaerobic fungi — these animals are able to pry apart plant polymers … to find beautiful diversity.”  Within that diversity of bacteria and fungi, O’Malley and her team are amassing all …
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Frequently Asked Questions: Project Management
… for proposals , and submit your proposal online using the Work Initiation Process (WIP) interface.    For commonly … the “ edit contacts ” page in your account. Use the form to update all information except email address. To update your … IMG/M   (citation: https://doi.org/10.1093/nar/gkaa939 Fungi: Mycocosm (citation: …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and … a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and … more efficiently than one strain could on its own.  In work published in  Synthetic Biology , the team used CRAGE …
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The Fungi That Survive In Antarctica
Black fungi are microscopic and mighty. They survive everywhere … of Tuscia researchers Laura Selbmann and Claudia Coleine are working with scientists from around the world – and the JGI …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets with the … (NERSC) has another supercomputer, Perlmutter that works at large scale. But nearby the JGI, a cluster called …
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Cocultivation of Anaerobic Fungi with Rumen Bacteria Establishes an Antagonistic Relationship
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JGIota: A Biofuel Breakthrough in Anaerobic Fungi with Michelle O'Malley and Tom Lankiewicz
… of UC Santa Barbara discuss the importance of studying anaerobic fungi, as well as a recent discovery that turns scientific presumption on its head and opens up a new avenue to explore for efficient biofuel production. …
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Workforce Development & Education Outreach
The JGI aims to inspire more students to enter the STEM workforce by fostering an understanding of our role in advancing the energy and … Biotech Partners … Learn more about internship programs we work with:  …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological … techniques and computational tools, the program supports foundational research related to soil nutrient … biological and environmental samples — including microbes, fungi, plants and soils. Through a combination of …
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Seasonal Dynamics of Core Fungi in the Switchgrass Phyllosphere, and Co-Occurrence with Leaf Bacteria
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High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460
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User Support Analysis Group
The User Support Analysis group provides computational analysis for … We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly …
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