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Viral Genomics Group
… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving … of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. … 4 , 1895–1906 Roux, S. et al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech …
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Evolution of a Fungal Gene Expression Regulator
… elements or transposons that can move to another location in the genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may help the pathogens …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … diversification and microbial diversity. Learn more about this work and further details on our Genomic …
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Game On: High School Students Drive Everglades Metagenomics Study
Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the … the next generation of scientists. She shares her thoughts about the experience below. In the summer of 2018, Jonathan … the Loxahatchee National Wildlife Preserve. They chose this location because much is unknown about the diversity of …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic … bulk of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling this … J. F., Hugenholtz P., Woyke T . Minimum information about a single amplified genome (MISAG) and a …
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Microbiome Data Science Team
… into data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. … in tackling grand challenges in Biology, with a special focus on microbiome research.  These efforts include … Bowers RM, et al. (2017) Minimum information about a single amplified genome (MISAG) and a …
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A Complex Confection Decoded: Sugarcane Reference Genome
… genetic code of sugarcane, researchers were able to map the location of genes that provide resistance to the brown rust disease that can devastate a crop. The Impact In … foundational genetic information that crop breeders can use to improve sugarcane varieties and advance a sustainable …
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Biotech Partners Summer Intern Co-Authors NAR Paper
Kaushal Sharma, one of five Antioch High School rising juniors … reviewing close to 3,800 metagenomes to verify geographic locations and assign latitude and longitude values. “This … tasks we assigned.”       Click here to watch a video about the Biotech Partner summer interns at the JGI. What …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … Biology .  Watch this webinar hosted by EMSL to learn more about BioSANS. Letters of Intent are due March 17, 2021 for … also welcome to apply to the FICUS program. Find out more about the FICUS program at:  jgi.doe.gov/user-programs . Q:  …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… peer through the waters and clouds of insects hover just above. Described as a “river of grass” that stretches … to apply the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall … to the refuge to collect soil samples from multiple locations. Back in the classroom, JGI researchers walked …
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JGI Scientists Pen Genome Watch Articles
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … .  The latest article, published January 27, is about engineering plants and their microbiomes for more … Sanger Institute.” Last year for the column, Woyke wrote about the research field’s move toward characterizing the …
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JGIota: The Algae Nicknamed ‘Chlamy’
This shorter episode is about a tiny, single-celled alga – Chlamydomonas reinhardtii … managed to sequence its genome, and what it has to teach us about other organisms – like plants. [ Editor’s Note: …
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