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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek to the heart of … Berkeley Lab campus. By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years … cleanup.lbl.gov .     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … .  Through this collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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The Big Deal About Short Plants
… link plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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Fungal Friends or Foes in Plant Roots
… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … Martin that contributed toward filling gaps on the fungal Tree of Life through the 1000 Fungal Genomes Project. … and enabling future metagenomics studies.   … The sequencing project was funded by the U.S. Department of …
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Ancient Algae Reveal Secrets of Plant Evolution
… 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , … Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … a unique window into the adaptations that enabled the first land plants to transition to terrestrial life.  These …
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Enlarging Windows into Understanding Gene Functions
… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … genes are turned on is known as DNA affinity purification sequencing or DAP-seq. The technology was developed by Ronan … 25, 2021 in Nature Methods , JGI researchers led by co-first authors Leo Baumgart and Juna Lee developed two …
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High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence
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Draft Genome Sequence of Frankia sp. Strain CN3, an Atypical, Noninfective (Nod–) Ineffective (Fix–) Isolate from Coriaria nepalensis
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Complete genome sequence and the expression pattern of plasmids of the model ethanologen Zymomonas mobilis ZM4 and its xylose-utilizing derivatives 8b and 2032
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Draft genome sequence of Dethiosulfovibrio salsuginis DSM 21565T an anaerobic, slightly halophilic bacterium isolated from a Colombian saline spring
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High-quality draft genome sequence of Ensifer meliloti Mlalz-1, a microsymbiont of Medicago laciniata (L.) miller collected in Lanzarote, Canary Islands, Spain
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High-quality permanent draft genome sequence of the Bradyrhizobium elkanii type strain USDA 76T, isolated from Glycine max (L.) Merr
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