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Ray Turner Completes Last Tour of Lab Duty at JGI
… vigilant stewardship as JGI’s Operations Deputy has come to a close as this previously retired Naval Commander … impact on her, “that you started building relationships across the Laboratory, and the way that you did it really … with BioEPIC, the building that is slated to rise alongside the IGB. … The U.S. Department of Energy Joint …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared their … with 86 participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying …
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Kjiersten Fagnan
… computing consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research … goals. … Joubert et al., “Attacking the Opioid Epidemic: Determining the Epistatic and Pleiotropic Genetic … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …
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Petra Byl
… oligotrophic ocean gyres. She uses genomic and transcriptomic sequencing along with laboratory manipulations to understand how nutrient stress impacts …
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Genome Sequence of Kosmotoga olearia Strain TBF 19.5.1, a Thermophilic Bacterium with a Wide Growth Temperature Range, Isolated from the Troll B Oil Platform in the North Sea
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying … how an interdisciplinary collaboration between three different principal investigators (PIs) harnessed JGI’s DNA … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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JGIota: Looking Back at Sequencing for Soybeans
… crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence … With a full genome sequence, researchers have been able to look into soybean’s strengths – along with a fungus that threatens this important crop. Hear …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … that showcase our collaborations and capabilities to enable great science that will help solve energy and … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Work With the JGI! Tips for a Winning CSP Proposal
The JGI’s Community Science Program gives researchers access to all kinds of sequencing, ‘omics and bioinformatics capabilities — and it’s open to scientists at any career stage, anywhere in the world, … Miranda Harmon-Smith, who helps shepherd CSP projects along. …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef Boeke, … Health) and Leslie Mitchell (Neochromosome) have worked to replace yeast’s native chromosomes with synthetic … international collaboration, with some artistic endeavors along the way. Eventually, the goal is to create an entirely …
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Crysten Blaby-Haas
… with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … AT, Blaby-Haas CE. (2024) Machine learning sheds light on microbial dark proteins. Nature Rev Micro 22, 63. Davidi L, … Google Scholar … Education … Awards and Service … Selected Publications …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant … , in Nature Biotechnology . Kellogg and her colleagues, along with researchers at the HudsonAlpha Institute for … also identified a gene associated with leaf angle, which determines how much sunlight leaves can get and in turn serves …
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