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High-quality PacBio draft genome sequences of 17 free-living Bradyrhizobium and four related Nitrobacteraceae strains isolated from arid soils in the Santa Catalina Mountains of Southern Arizona
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission … of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This … Yasuo Yoshikuni is the DNA Synthesis Science Program Head at …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal … genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and … about the microbial communities deep underground, and before the pandemic, they took the JGI on a sampling field …
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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating Collaborations for User Facilities (FICUS) program for fiscal year 2026, in … user facilities. Focus areas for these projects include biofuels, biomaterials and bioproducts; hydrobiogeochemistry; …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the journal … Laccaria bicolor on MycoCosm … Laccaria bicolor has a symbiotic relationship with poplar …
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research … in professional development enrichment activities. For some students in the 2021 cohort, this was their first … Blurring the Line Between Plasmids and Phages …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … within their rumen. There is another climate-minded reason for studying rumen: Livestock live off plant matter, and …
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The JGI announces 2024 awardees for our Community Science Program annual call
… From left to right: [above] Olivia Ahern, Adriana Corales, Hugh Cross, Megan … JGI is excited to announce the fifteen scientists selected for our 2024 Community Science Program Annual Call. “It’s exciting to see the diverse portfolio of successful CSP proposals this year,” noted Tanja Woyke, …
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JGI announces 2025 Functional Genomics awardees
… [ Pictured from left: [Above] Hao Chen, Matthew Cope-Arguello, Theophilus Olufemi … Benjamin Woolston. ] Each year, the JGI accepts proposals for state-of-the-art functional genomics research from scientists who …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … in soil health through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as … P. vulgaris on Phytozome … Plant Datasets …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
…   The JGI is excited to announce the 18 scientists selected for our 2025 Community Science Program Annual Call. These … degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s …
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