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… integrative biology. Researchers who are applying genomic sequence information to BER-funded activities of plant … Populus 8:03 PM Natural Diversity in  Setaria  and a Novel Gene for Shattering   In mid-2019, JGI and KBase will be …

… Wang Project:  Embeddings Based Clustering of Biosynthetic Gene Cluster for Novel Natural Product Discovery Kayla Kelly … Brian Bushnell Project:  Machine Learning Applications in Gene Annotation Masato Terasaki Mentor: Yumary Vasquez … and Identification of Mitochondrial Plasmids from DNA Sequence Moitrish Majumdar Mentors: Bikash Shrestha, Crysten …

… often due to, for example, tight regulation of biosynthetic gene clusters (BGCs) in native hosts, the complexity of … expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE …

… 2007, the JGI has been working on identifying switchgrass genes related to biomass production, drought tolerance, and … candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a … of Texas at Austin produced a high-quality reference sequence of the complex switchgrass genome. The reference …

… Hungate has gotten more interested in microbes with the potential to impact global climate change, he said. “To … can make phenazines, and which microbes are most capable of generating phenazine production.” This led to them … these amazing technologies that the JGI has to identify and sequence who’s making what, that the context at a microscale …

… and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published … a JGI Flagship Genome and the first tree to have its genome sequenced. Having this first genome sequence of a mycorrhizal fungus shifted the focus from …