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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Genome evolution in the allotetraploid frog Xenopus laevis
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The Genome of the Western Clawed Frog Xenopus tropicalis
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JGI Launches Latest Strategic Plan
… in the heart of the Lab’s 200-acre campus—with the big move from leased space in Walnut Creek, Calif. scheduled to begin … for driving the monumental effort, which considered input from scores of individuals, including JGI staff, Biosciences …
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Extracting the Secrets of Secondary Metabolites
… study in which researchers paired CRISPR and CRAGE technologies. While CRISPR (Clustered Regularly Interspaced … CRAGE allows for the transplanting of these BGCs from one organism into an alternate host via a landing pad … to leverage their powers in agriculture, pharmaceuticals, biofuels and beyond.  …
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Taking Stock of the Known and Unknown Microbial Space
… Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes … regulating global nutrient cycles. The information gained from understanding the interactions between microbes, hosts, … applied to multiple research areas including agriculture, biofuels and bioproducts, and medicine. Wading through 30 …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the last  25-plus … users — have access to high-quality, assembled datasets from all of this information. The JGI aims to create … has been a collaborative effort. For example, with support from the  Exascale Computing Project , the JGI — along with …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… with excitement and determination as they came onsite. From data carpentry to science communications, their … Liu, Building Expression Host in Bacilli Class using CRAGE Technology Emerald Nash and mentor Jonelle Basso, … BGC Detection Tools and Exploring Novel BGC Detection Techniques on Fungal Genomes Video Transcript: Emerald Nash …
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Len Pennacchio
… at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where … by DOE and through continued competitive grant support from NIH. … Len Pennacchio is the JGI's Deputy of Genomic Technologies. oClick to learn more about the offerings and …
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A Collaboration to Improve Plant Genome Annotations Across Species
… works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement for … – the complete set of RNA molecules transcribed from all the genes within a cell or tissue at a specific … 12 plants, which are JGI Flagship Plants, mostly related to biofuels and feedstocks. And then we expanded that to …
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Better Living Through Bioenergy
… Biofuels and bioproducts are a way to kick our addiction to …
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JGI Scientists Pen Genome Watch Articles
… leads the  Microbial Program at the JGI, received a message from Andrea Du Toit, senior editor for  Nature Reviews … this role. “We work with leaders in environmental genomics from around the globe through a collaborative network of … a natural fit and a nice complement to the contributions from the Wellcome Sanger Institute.” Last year for the …
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