Results

FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.
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Multiplex knockout of trichome-regulating MYB duplicates in hybrid poplar using a single gRNA.
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Label-free structural imaging of plant roots and microbes using third-harmonic generation microscopy
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Root cap cell corpse clearance limits microbial colonization in Arabidopsis thaliana
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which microbes are handling specific nutrients, or what they're doing with those nutrients, and even how quickly. But there's a catch: SIP labwork and analysis …
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Three pairs of fungal Trametes strains isolated from distinct geographic origins show conserved genomic features and adaptive response to plant biomass
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, … facilitate discovery of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, … He is particularly interested in understanding how, when and why microbes decide to produce which …
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JGI-USCCN Strain Sequencing Opportunity
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Site-Selective C–H Halogenation Using Flavin-Dependent Halogenases Identified via Family-Wide Activity Profiling
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Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
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Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria
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Uncovering secondary metabolite evolution and biosynthesis using gene cluster networks and genetic dereplication
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