The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
Results
Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage
Genome analysis of ‘Candidatus Ancillula trichonymphae’, first representative of a deep‐branching clade of Bifidobacteriales, strengthens evidence for convergent evolution in flagellate endosymbionts
ContScout: sensitive detection and removal of contamination from annotated genomes
The microbiome of a bacterivorous marine choanoflagellate contains a resource-demanding obligate bacterial associate
Microbial species delineation using whole genome sequences
Targeted and shotgun metagenomic approaches provide different descriptions of dryland soil microbial communities in a manipulated field study
Comparative Genomics and Transcriptomics to Analyze Fruiting Body Development in Filamentous Ascomycetes
Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic responses
An integrated metagenomic, metabolomic and transcriptomic survey of Populus across genotypes and environments
Self-Buffering system for Cost-Effective production of lactic acid from glucose and xylose using Acid-Tolerant Issatchenkia orientalis
Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi
