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Accelerating Metagenomics Discoveries with Deep Learning
… insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … He also aims to detect structural similarities in proteins that low sequence identity may belie. The technology he’s … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying …
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MGM Workshop at Fisabio Summer School 2025
Register here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and … will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by …
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Methane Makers in Yosemite’s Lakes
… and met local wildlife (a marmot!) as they’ve sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. These lakes are isolated, …
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JGIota: Looking Back at Methane-Making Microbes
… 2010, the JGI has supported researchers studying those microbial methane-makers. Eventually, that could help us dial back their emissions, while still …
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The Busy World of Deep Sea Eruptions
… underwater volcanoes and hydrothermal vents — where lively microbial communities thrive, and even support entire …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the … and Mark Soghomonian share what it was like to take on one of these genomes.  …
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Extracting the Secrets of Secondary Metabolites
… further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not … survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … describe the functions of the biosynthetic gene clusters that produce them. The Impact Secondary metabolites are …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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Access to Rock Star Scientists
… their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further … is so nice and willing to help. The second is the training that I am receiving. The mentorship I am receiving at JGI is …
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JGI announces second round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel research … under our Community Science Program .  Below find a list of the second round of researchers accepted for 2023. …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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Axel Visel
Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … … 2021 LBNL Director’s Award for Exceptional Achievement in Diversity 2014 LBNL Director’s Award for Exceptional … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, …
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