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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a previous effort, an international consortium recommended specific … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this … they are addressing the world’s most pressing energy and environmental challenges.  The invited talks emphasize how …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 … highest honors! Tringe, a microbiologist, was recognized for “advances in sequence-based studies of microbial …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields …
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Annual Meeting 2027
…   Save the Date: March 16–18, 2027 The next JGI Annual Meeting will be held in … this page as further details become available. Sign up for our newsletter to receive updates.    … Stefani Ferreira , JGI Administrative and Logistics Support  …
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VEGA Symposium
…   Register here  Registration fees:  Early Bird rates available now General & Berkeley Lab … campus. Organized every two years since 2018, the goal of this symposium is to bring together a “Viral Ecogenomics” … VEGA 26 will take place at the UC Berkeley MLK Building, in the …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 Annual … at the JGI’s history, from its beginnings in the sequencing for the Human Genome Project out to the future of the … , Former Director of DOE’s Office of Biological and Environmental Research “There are two kinds of scientific …
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using … revealed that just a handful of enzymes are needed to transform zealexins and related precursors into a bonanza of … Terpenes are important in plant growth, defense, and environmental interactions, and also have industrial …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome … works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement … descriptions from nearest phylogenetic neighbors. Our pipeline allowed us to add expression-derived additional …
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Improved Draft Genome Sequence of Microbacterium sp. Strain LKL04, a Bacterial Endophyte Associated with Switchgrass Plants
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Ice cover extent drives phytoplankton and bacterial community structure in a large north‐temperate lake: implications for a warming climate
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Coral mucus rapidly induces chemokinesis and genome-wide transcriptional shifts toward early pathogenesis in a bacterial coral pathogen
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