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Decoding Yellowstone’s Microbial Mats
… Life as we know it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two billion years ago. A team of researchers set out to Yellowstone National Park to study how cyanobacteria … adopted new technologies, and made a few discoveries about the microbial mat denizens.  …
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Methane Makers in Yosemite’s Lakes
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Silver age of GOLD introduces new features
… 25 years ago, the  Genomes OnLine Database has matured from six projects on a spreadsheet into a flagship  genomic … GOLD not only curates sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome … National Laboratory (Berkeley Lab), but also those imported from public repositories, as well as project data entered by …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… with synthetic versions. This project has turned out to be an international collaboration, with some artistic …
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Large‐scale cultivation of the bumblebee gut microbiota reveals an underestimated bacterial species diversity capable of pathogen inhibition
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Tonoplast sucrose transporter SUT4‐dependent sugar partitioning modulates phenological transitions and reproductive success in poplar
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JGI@25: Studying Sorghum’s Survival Skills
… solve energy and environmental challenges. Sorghum stands out as a candidate feedstock for biofuels thanks to its … and Great Lakes Bioenergy Research Center) and his team set out to compare different varieties of sorghum. Initially, …
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‘Candidatus Adiutrix intracellularis’, an endosymbiont of termite gut flagellates, is the first representative of a deep‐branching clade of Deltaproteobacteria and a putative homoacetogen
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Rex Malmstrom
… The Microscale Applications group also carries out custom preparative work for difficult user projects, … University of Delaware’s Theodore Wolf Prize for outstanding dissertation in life sciences 2006 …
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A User-Centered Approach to Accessing JGI Data
… current Data Restriction Policy requires that users know about the FY Funding Year, and the publication status in … Portal work well with KBase and NMDC? A: We have reached out to KBase regarding use of our search API. They have …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… pine, Douglas fir and Engelmann spruce–to learn more about conifer needle microbiomes. The survey showed what these … elements across all of the metagenomes. Learn more about her time at the JGI here . Bennett is applying the same … the microbiome phyllosphere of black oak leaves throughout Northern California.  …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… and dominant populations in oxygen-poor environments without oxygen deep below ground. These archaea fix carbon and … foreign genetic elements by incorporating short sequences from infecting viruses and phages. In these sequences are … to viruses. To do so, they compared samples collected from an aquifer in 2012 and 2018 against a biofilm sample …
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