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Gotta Catch 'Em Gall
… and the Joint BioEnergy Institute) are looking for new ways to engineer plants. So they’ve looked into wasps that program oak trees to raise their young in structures called galls.  In this episode, hear from Kasey and Patrick about how this project unfolded, and …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint … – the complete set of RNA molecules transcribed from all the genes within a cell or tissue at a specific … resource. To demonstrate that, we included datasets from two species, one of which is sweet sorghum Rio from a …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared their … data.  Metagenomic data, or DNA sequencing data gathered from whole samples rather than single cells or isolated … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change … in the ocean drive the biological pump that takes carbon from the atmosphere and keeps it in the deep ocean. With … marine microbes and by extension, the ocean’s capacity to act as a carbon sink. Summary As global temperatures …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies The Science The  Metagenome … protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a protein identified from their studied system results in seeing their predicted …
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Year in Review: JGI’s 2018 Progress Report Available Now
… Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and to better … Copies are available online – click here to go download one from the archive of JGI Progress Reports. Print copies will …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… their careers in science. Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new skill sets … : So this summer what I learned at the JGI is how to really work in the government lab. And I find this really …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Congratulations to the 2023 Highly Cited Researchers from the JGI recognized … This year’s list features 6,849 individual researchers from 67 countries. Those from the JGI whose publications …
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JGI & KBase at PAG XXVII
… January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE … Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and the JGI about collaborative science …
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JGI Announces 2025 New Investigator Portfolio
… Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, … Marlis Reich, Taniya RoyChowdhury and Mar Schmidt; [bottom] Cody Spiegel, James Tan, Emma Timmins-Schiffman, … Each year, the JGI searches for novel research projects from PIs who have not led any previously accepted …
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Fungus Fuels Tree Growth
… symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata … of Florida collected forest samples of poplar and soil from Washington and Oregon. The cuttings included genotypes from the DOE BioEnergy Science Center (BESC), predecessor …
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science … two interns returned to re-engage with their mentors from the previous year and continue working on their …
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