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… ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … have also harnessed CRAGE to create a plant-fertilizing microbiome. In work  reported in  Applied and Environmental … — a proof-of-principle for investigating plant-microbe interactions. A final recent advance in CRAGE is the …

Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at …

Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen interest in the bioenergy and biotechnology potential of algae, and sampling of the length and breadth of algal … sequence information to BER funded activities of plant systems. We will describe how to apply for a project with …

A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was … approved through the JGI Community Science Program, to use microbiome science to help make plants more resilient to …

Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … novel tools for large-scale in situ gene expression analysis in multicellular organisms. During his postdoctoral … and implementation of scientific policy, engaging in interactions with the scientific community at large. … 2021 …

New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … wasn’t quite accurate, and maybe anaerobic fungi living in soils or the guts of livestock were more capable than … cultivated anaerobic fungi (Neocallimastix californiae) on sorghum, switchgrass and poplar, then monitored changes to …

… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … functional assessment, host prediction, and phylogenetic analysis. The development of CheckV helps researchers to … scientist Stephen Nayfach, the study’s first author in the Microbiome Data Science group led by Nikos Kyrpides. To …

Analysis reveals the microbial community involved in a … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … to access the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since …

… host, a photosynthetic microalgae, and a little-characterized microbiome. When warm waters stress corals, it might be …

… just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS … support, how much help can users expect for data analysis of the different omics analysis? Are users expected … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

Workshop The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and … research results in genomics, metagenomics and the human microbiome. The workshop will train participants in …

Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … School of Human Genomics, Sanger Center 2011-  Co-Organizer “Systems Biology of Gene Regulation and Genome Editing,” Cold …