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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past … with excitement and determination as they came onsite. From data carpentry to science communications, their schedules … Williams and mentors Igor Grigoriev and Bishoy Kamel, A Comparative Analysis of Metabolic Pathways in Fungal …
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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar R570 has been  published … The reference genome of R570 is available on the JGI plant data portal,  Phytozome .   …
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Toward More Efficient Artificial Photosynthesis
… that mimics chloroplast function within a cell-sized system. The Impact Photosynthesis harnesses carbon captured … Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … where photosynthesis takes place. The result: an integrated platform that mimics the photosynthetic process …
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Scaling Up Existing Skill Sets
… Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has your summer internship … I got to work with an enormous set of fungal genomics data. For me, it was an opportunity to adapt my existing … Year: 3rd year undergraduate student Mentor: Zhong Wang, Genome Analysis What effect has your summer internship with …
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How Filamentous Fungi Sense Food
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … genes. This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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Genomewide annotation and comparative genomics of cytochrome P450 monooxygenases (P450s) in the polypore species Bjerkandera adusta, Ganoderma sp. and Phlebia brevispora
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Comparative analyses of foregut and hindgut bacterial communities in hoatzins and cows
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Regulation of Cell-to-Cell Communication and Cell Wall Integrity by a Network of MAP Kinase Pathways and Transcription Factors in Neurospora crassa
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… Research Center One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated Bioimaging (MBIB) Division, and Energy Storage & … biology, single cell and systems biology, omics, and big data science, machine learning for experimental science, …
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Bioinformatic analysis of the distribution of inorganic carbon transporters and prospective targets for bioengineering to increase Ci uptake by cyanobacteria
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Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution
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