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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi … The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope probing (SIP) …
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SIPs with Standards
Stable Isotope Probing (SIP) is a powerful technique for studying microbial … SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to more researchers. Ultimately, the goal is to generate SIP data that can be useful to multiple teams and …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to … understanding which microbes are present in a sample, to generate data about which organisms are active, and which …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging … for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of Science user facility with broader national …
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JGI announces 2024 New Investigator portfolio
The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel … under our Community Science Program . Below find a list of researchers whose proposals were accepted for 2024. …
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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral EcoGenomics & Applications (VEGA) symposium was to bring together a “Viral EcoGenomics” community to foster … in natural ecosystems, and functionally explore viral genetic diversity toward innovative biotechnological and …
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Accelerating Metagenomics Discoveries with Deep Learning
Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 … rather than single cells or isolated strains, is easy to generate, but difficult to assemble and interpret. The … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms …
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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in … Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for …
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek … labs in one long building at Walnut Creek, after countless generations of sequencing platforms (up to 120 sequencing …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — … degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s … CSP investigators,” said Tanja Woyke, Deputy Director of JGI’s User Programs. “Many of these projects are large in …
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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and …
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