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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, … Otani H, Udwary DW, Mouncey NJ. Comparative and pangenomic analysis of the genus Streptomyces. Sci Rep. 2022 Nov … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 Ernest Orlando Lawrence … director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and JGI’s deputy for user …
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Yasuo Yoshikuni
… to harness the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and … … DNA Synthesis Science Program … Education … Selected Publications … Awards and Honors …
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Green Algae Reveal One mRNA Encodes Many Proteins
… – in two species of green algae, Chlamydomonas reinhardtii and Chromochloris zofingiensis . “I was scrutinizing the … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
Synthetic Biology Who’s Invited? All Berkeley Lab Employees and Affiliates. When: August 29th, 3:00 pm – 5:30 pm 3:00 pm … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Mindfully Moving JGI
… at maximum) maintained by a workforce that numbered more than 100 at its peak, all the machines were switched off. Over … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric … research of these newly found methanogens  in diverse ecosystems with  support from a DOE Established Program to … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Tracking the Origins of Methane-Producing Microbes
Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are estimated to … were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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JGIota: The Algae Nicknamed ‘Chlamy’
… single-celled alga – Chlamydomonas reinhardtii – that’s managed to have a big impact. UC Berkeley plant biologist Sabeeha Merchant explains why she works on … is also a faculty scientist in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences …
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Extracting the Secrets of Secondary Metabolites
… a proof-of-concept study in which researchers paired CRISPR and CRAGE technologies. While CRISPR (Clustered Regularly … of robust tools available for carrying CRISPR into microorganisms. CRAGE (Chassis-independent Recombinase-Assisted … monitor loss- and gain-of-function. The study’s analytical data shows peaks and valleys in secondary metabolites as …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
In this short video, UC Merced undergraduate and graduate students share how their summer internship … with their JGI mentors, what challenges they overcame, and what new skill sets they look forward to taking back to … I started this, uh, summer internship was working with big data, but something that I learned from this program was how …
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