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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… support understanding of plants, microbes and environmental communities that have relevance for DOE’s bioenergy and … manager in 2006 when the JGI transitioned from human to microbial genetics. Drell held the role until he retired in … “For [DOE’s Biological and Environmental Research] and the communities of science you serve and enable, it’s really the …
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MGM Workshop at Fisabio Summer School
… June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is …
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Trent Northen
… bacterial polyphenol metabolism in an anoxic wetland soil. Nat Commun. 2021 Apr 29;12(1):1-6. … Couradeau E et al. Probing the active fraction of soil microbiomes using BONCAT-FACS. Nat Commun. 2019 … Diamond S. et al. Mediterranean grassland soil C-N compound turnover is depth stratified, rainfall …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… metabolites for multiple applications. The planet’s microbial diversity is immense, yet much of it remains … “This project has helped to define the current shape of the microbial tree of life by filling in genomic information for … bias the analyses. MAGs could also represent composites of populations where individual strains are collapsed, while …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… of fungi by James et al. and Sekimoto et al . In both studies, however, Olpidium was unexpectedly grouped with … known fossil record of land plants and evolved in early microbial biocrust environments.     …
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DOE JGI Interns Share Their Summer Experiences
… and, Lizhen Shi , a graduate student conducting independent studies in Zhong Wang’s group. …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… JGI, is not representative of the diversity in the population, especially here in California. The opportunity … Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial Interactions Group who has mentored several of the …
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Tomas Tyml
… and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our understanding …
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A Collaboration to Improve Plant Genome Annotations Across Species
… inconsistency makes interpretation and integration across studies difficult. Our Plant Gene Atlas resource addresses … could be potential future targets for functional genomic studies. We also looked at the cross-species comparable …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… Q:  Does NEON have or plan on collecting RNA samples from soil or surfaces for microbe-focused collections? A: Not at …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … microbes, the answer is no. They refer to the infected microbial cells as virocells, a change in name first … 20% to 40% of the microbes are infected at any given time. Microbial viruses can thus have significant impacts on the …
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