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Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi
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Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales
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Rediscovery by Whole Genome Sequencing: Classical Mutations and Genome Polymorphisms in Neurospora crassa
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis
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Rex Malmstrom
… genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … the arbuscular mycorrhizal symbiosis. Nature Plants 10, 673–688 Vyshenska et al. 2023. A standardized quantitative … J.S. et al. 2019. Probing the active fraction of soil microbiomes using BONCAT-FACS.  Nature Comm 10(1) 1-10 …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… uncultured and unknown majority of microbes in, on and around the planet–through techniques including single-cell … genomics and metagenomics. They cited her “landmark” 2013 Nature paper , which uncovered nearly 30 major previously uncharted branches of the tree of life. …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… first paper that describes sorghum’s response to drought, from a large-scale field experiment to uncover the … Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … drought condition, no water was given during weeks 3 to 8 before flowering. In the post-flowering period …
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The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata
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The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata
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Chapter Five The Sphagnum Genome Project A New Model for Ecological and Evolutionary Genomics
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Implications of the Plastid Genome Sequence of Typha (Typhaceae, Poales) for Understanding Genome Evolution in Poaceae
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