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Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus

Chomping Toward Better Plastic Recycling

… We know all kinds of things about plastic – except, how to break it …

Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation

Symbiotic Burkholderia Species Show Diverse Arrangements of nif/fix and nod Genes and Lack Typical High-Affinity Cytochrome cbb3 Oxidase Genes.

CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner

Plastome evolution in annual Brachypodium species reveals widespread heteroplasmy and chloroplast capture, lineage-specific codon usage bias, and low positive selection

Root cap cell corpse clearance limits microbial colonization in Arabidopsis thaliana

Three pairs of fungal Trametes strains isolated from distinct geographic origins show conserved genomic features and adaptive response to plant biomass

MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses

IMG/VR

… JGI's Simon Roux describes the structure and content of the … the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel capabilities of IMG/VR to browse and …

Thawing permafrost, microbes, and viruses: Gary Trubl — Part 2

… Gary Trubl, a virologist and postdoc at Lawrence Livermore National Laboratory, is using bioinformatics and isotopes to track how viruses influence the flow of carbon in permafrost. …

JGIota: Sequencing Shiitakes with David Hibbett

… David Hibbett of Clark University fills us in on the kind of … shiitake mushrooms special. This week, he and 39 collaborators published a paper tracing how these mushrooms have evolved. …

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.