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Integrating Experimentation with Data
… (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated Laboratories: Integrating Experimentation with … informatic tools at no cost. The JGI and EMSL are supported by the DOE's Biological and Environmental Research (BER) …
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Scaling Up Existing Skill Sets
… in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … 4th year PhD student in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has … Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
JGI will advance the bioeconomy, leveraging partnerships to advance foundational science, creating opportunities for … its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at … and environmental remediation—all priorities identified by the DOE Office of Biological and Environmental Research …
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In 2019, the …
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2022 Progress Report
… the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from … Science user facility at Lawrence Berkeley National Laboratory (Berkeley Lab), is to become the leading integrative genome science user …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, … Phytozome . Researchers hope to have demonstrated the potential of ferns as sources of novel genetic material with … next-generation plant biology. … The work conducted by the US Department of Energy Joint Genome Institute is …
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Busting the Unbreakable Lignin
… components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: … to any type of lignin breakdown — and lignin breakdown by anaerobic fungi therefore thought to be impossible.  And … JBEI. The JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The …
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David Goodstein
… at Cornell, IBM, Utah State University, and semiconductor equipment manufacturer KLA-Tencor before joining the JGI … et al., 2020.  Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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JGI announces 2024 New Investigator portfolio
The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each … of desert grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean …
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Axel Visel
Institute in Hanover, Germany, where he developed novel tools for large-scale in situ gene expression analysis in … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, … chromatin signatures reveal a regulator of lipid metabolism in microalgae .  Nature Plants 1: 15107 Lupiáñez …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… strategy we are far more familiar with: differentiating into male and female sexes. For the first time, the sex … relative  Populus trichocarpa,  or the poplar tree, are potential biofuel feedstocks of interest to the U.S. … for the next generation. Understanding the mechanisms by which they reproduce can help guide breeding efforts. For …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have discovered … to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … However, genome and metagenomic sequencing conducted by the U.S. Department of Energy Joint Genome Institute, a …
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