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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. … gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … provided by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) …
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Tracking the Origins of Methane-Producing Microbes
… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … user facility, report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform … separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of them archaea. The …
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Fishing for Novel Cellulose Degraders
… genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a … When they tested the screen method on a microbial community from geothermal hot springs, they uncovered a novel … To validate the predicted cellulases from their captured genomes, the team then used DNA synthesis and cloning, …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion … in the heart of the Lab’s 200-acre campus—with the big move from leased space in Walnut Creek, Calif. scheduled to begin …
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for the … the evolutionary and practical significance of plant pan-genomes including understanding polyploid genome evolution …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … Science Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi from the School of Natural Sciences and started a program …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … 5mC is an important piece of how they regulate their genomes, but is not well understood in fungi. A team of … Impact Interactions between plants and fungi run the gamut from mutually beneficial to antagonistic. In fungi, 5mC is …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … one-third of human-created methane emissions actually come from livestock — specifically, from the methane-making … has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community …
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Enlarging Windows into Understanding Gene Functions
… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … The technology expresses the transcription factor proteins from a DNA template amplified directly from either genomic … it can also serve as a stepping stone to studying many genomes simultaneously through multiDAP, which allows …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership … at Berkeley Lab. She is spearheading the development of a joint user capability between the JGI and Molecular … She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de …
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The Genome Portal of the Department of Energy Joint Genome Institute
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The Phaeodactylum genome reveals the evolutionary history of diatom genomes
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