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Draft genome sequences of Butyrivibrio hungatei DSM 14810 (JK 615T) and Butyrivibrio fibrisolvens DSM 3071 (D1T).
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Draft genome sequence of Mesonia hippocampi DSM 29568T isolated from the brood pouch of a diseased male seahorse.
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Whole genome sequence, CAZyme repertoire and sugar metabolic model of the phytopathogenic fungus Kretzschmaria zonata GFP 132
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint … are present in more than two copies, a condition known as polyploidy. The multiple copies arise from past …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the … computers, and it seems like my younger counterparts are a little bit stronger in computing, so I was kind of worried … Also my area of expertise over the past couple years is a little bit different from what I did during the summer. But …
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JGI Announces 2026 Functional Genomics Recipients
… Ritu Singh, Jiaqi Tan, Claire Willing Each year, the Joint Genome Institute (JGI) accepts proposals for state-of-the-art functional genomics research from scientists who … biodesign and omics capabilities to enhance understanding of gene and genome function. Understanding these functions …
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The fungus that made itself at home
… plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the … of Oslo scientists and including researchers at the Joint Genome Institute, a DOE Office of Science User Facility, … how the Serpula fungi have adapted in an environment with little to no competitors for resources. On wood blocks of …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … Filling in the Plant Tree of Life …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of SAR11 … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … address of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, introduced … no more similar than random,” Holmes said. Given the vast unknowns contained in metagenomic data sets, Holmes and his …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of the chemicals they need to survive. To fill in their …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … activities. Aside from being a key component of the marine food web base, they also feature in many nutrient …
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