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How to Target a Microbial Needle within a Community Haystack
… the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A team led … detailed in the journal  Microbiome , combines multiple techniques and was demonstrated using a specific group of … of this protocol was enabled by the JGI’s  Emerging Technologies Opportunity Program . The ETOP helps …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… host to replicate. Sequencing genetic material directly from samples sidesteps these challenges, since it doesn’t … Nikos Kyrpides at the JGI led a team that combed datasets from around the world, finding over 125,000 partial and … The new database was called IMG/VR. It featured samples from different ecosystems all over the world, including …
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Toward More Efficient Artificial Photosynthesis
… system. The Impact Photosynthesis harnesses carbon captured from the atmosphere in a process that generates energy. The … pathway that would more efficiently remove carbon from the atmosphere than current natural processes and use … a long-term effort to capture and utilize the excess carbon from the atmosphere for producing high value bioproducts. …
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Expanding Virophage Diversity
… maturation. Recently reported in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome … has extended the possible virophage genome size range from 13.8-29.3 kilobases (Kb) to 10.9-42.3 Kb. Additionally, the gene counts have similarly gone up from 13-25 to 12-39. “Overall,” the team concluded, “we …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… in science and research, two undergraduate students from UC Merced recently had summer internships in Walnut … (NSF) and supports underrepresented minorities in science, technology, engineering and math (STEM) fields. At the 2016 … CAMP students who earned outstanding research awards. From the 99 students who attended, representing 9 UC …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… will bridge fundamental knowledge gaps to advance biotechnology and biomanufacturing.  As a leader in genomics … “The plan looks toward exciting new directions in science, technology and data science for the JGI,” noted JGI Deputy … planning workshops, as well as collecting extensive input from all JGI staff, Biosciences and Berkeley Lab leadership, …
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Pinning Down a Piece of Photosynthesis
… light microscope, and fickle, often hiding their function from even the most determined scientist.  Recent work in  … their groupings.  One pivotal effort along these lines came from UC Berkeley professor and longtime JGI collaborator … National Laboratory’s NSLS-II used multiple x-ray techniques combined with advanced computational simulations …
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A Mentor’s Perspective on Training the Next Generation
Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and …
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Better Crops With a Pointillist Approach to Plant Genomics
… peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants …
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Back in the Lab: the 2023 Summer Intern Experience
… work, but the opportunity to collaborate with and learn from fellow researchers onsite as well. …
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Graduate Students Get Thesis Research Opportunity at the JGI
… result of the latest call , a total of 70 graduate students from 52 universities were selected to carry out part of … of genomics and JGI scientists are developing cutting edge technologies to answer our most pressing problems. I’m very … also serve as a mentor for another SCGSR awardee, Ian Rambo from Brett Baker’s lab at the University of Texas-Austin. …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
… how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what they’re doing, he …
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