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2023 Progress Report
… Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced … research community in studies of complex biological and environmental systems. We optimize our service to the …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a … Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… terabytes of data with MetaHipMer2. And the National Energy Research Scientific Computing (NERSC) has another … capable of running smaller assemblies — so we head there for a sense of what this supercomputing looks like. …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence … research collaborations through the U.S. Department of Energy (DOE)’s Visiting Faculty Program (VFP) . The VFP is a summer professional development program for current faculty. Applying faculty members may invite up …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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Virus-Microbe Interactions of Mud Island Mangroves
… the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his … as a computational biologist. My primary future goal is to form a startup.” …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications … to submit white papers to the CSP  New Investigator call for proposals.  Tips: Contact us with your questions … to make sure the goals, experimental design, and plan for data utilization are clear. Contact JGI staff for …
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JGI announces second round of 2023 New Investigator awardees
… circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE missions and … find a list of the second round of researchers accepted for 2023. Proposals are accepted year-round; the next review …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… To set up flexible, repeatable experiments on plants and microbes, Trent Northen’s group at Berkeley Lab …
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DOE JGI Interns Share Their Summer Experiences
… analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, … Cristhian Gutierrez and Bryan Rangel Alvarez are both  California Alliance for Minority Participation (CAMP) students … Also onsite this summer were two U.S. Department of Energy Science Undergraduate Laboratory Internship (SULI) …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group … the development of the virus and plasmid workflows for the National Microbiome Data Collaborative.  This award …
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