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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … the virions out and moving the carbon within the microbial community. These findings also suggest that lytic viruses …
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JGI@25: Studying Sorghum’s Survival Skills
… being a staple grain eaten around the world, sorghum’s potential to adapt and thrive in our changing climate has … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … its Sorghum bicolor reference genome and releases it to the community. 2014: GENCODE project begins. To support growing …
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Scaling Up Existing Skill Sets
… in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … industry. I really liked the fairly flat organizational structure, and found everyone to be welcoming and helpful. … Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer …
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JGIota: Looking Back at Sequencing for Soybeans
… The soybean is a crop that could boost biofuels and fertilize fields. So in 2010, … have been able to look into soybean’s strengths – along with a fungus that threatens this important crop. Hear …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a … in the atmosphere. The work was enabled in part through the Community Science Program (CSP) of the U.S. Department of … (Berkeley Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal … had their DNA sequenced at the JGI as part of a 2014 Community Science Program project. The results revealed that … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of …
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Identification of novel biomass‐degrading enzymes from genomic dark matter: Populating genomic sequence space with functional annotation
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Novel function of the human presqualene diphosphate phosphatase as a type II phosphatidate phosphatase in phosphatidylcholine and triacylglyceride biosynthesis pathways
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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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