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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a … completed by the JGI. It has since been cited more than 5,400 times, including a number of projects that point to the … availability via Phytozome. In 2015,  a new and revised version brought the soybean sequence up to date with current …
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Hiroshi Otani
… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … S, Otani H, Udwary DW, Doering DT, Mouncey NJ. Cytochromes P450 involved in bacterial RiPP biosyntheses. J Ind Microbiol … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … Boston University ( magna cum laude ) … Serrano et al. 2024.  Spatial co-transcriptomics reveals discrete stages of … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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Mateus Fiamenghi
Mateus’s research is focusing on the identification and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s …
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Massie S. Ballon
… in science communication from UC Santa Cruz. She is one of the Biosciences Area representatives to Berkeley Lab’s … Bias Certification 2020-present, Project Management Professional (PMP) Credential Graduate Certificate, UC Santa … for sustaining the integrity of the JGI brand through an integrated marketing and communications approach in …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … the impact of this tiny, single-celled organism as a model system. “People name genes based on similarity to the Chlamy …
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Danielle Goudeau
… collaborators. This work combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, … novel flow cytometry protocols for targeted recovery of specific microbes. …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … how KBase (www.kbase.us) can support biological data analysis. It is a free, open source analytics platform … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in … themselves can also be modified. The best-known example of a modified DNA base is a methylation of the base cytosine …
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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … This resource also helps in performing cross-species comparative transcriptomics. *The HudsonAlpha Genome … sets, such as sorghum internode time course data from 4 different genotypes by Dr. John Mullet; Dr. Tom Juenger …
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