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… where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the … over 10k samples/year, Dr. Louie and her team work with other JGI scientists in development of new, advanced … DNA-SIP for helping identify active micro-organisms within complex communities, and custom software for …

… hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out … and bioproducts, and medicine. Wading through 30 years of sequencing data, the team composed of Wu, Seshadri, Nikos …

… technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of … of regulon identification by in vitro transcription-sequencing (RIViT-seq) to facilitate the characterization of … which combines an in vitro transcription assay with RNA sequencing, they were able to identify the target genes of …

… Currently one of the best ways to study such viruses is by sequencing the bulk DNA or RNA contained in a sample that … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

… switchgrass transformation pipeline and, in collaboration with industrial partners, generated hundreds of transgenic … tolerance, and the mechanisms by which plants interact with their microbiomes. In addition, his group conducts … al. 2014 Genome Diversity in Brachypodium distachyon : Deep Sequencing of Highly Diverse Inbred Lines 2014 Plant Journal …

… talks emphasize how the research infrastructure – DNA sequencing, synthesis, metabolomics, data analysis, and new …

… genes are turned on is known as DNA affinity purification sequencing or DAP-seq. The technology was developed by Ronan O’Malley , who leads the Sequencing Technologies Group. In an article published … workflow that reduces the time and cost associated with this purification step, and Baumgart continued and …

… Olpidium attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene … the zoospores were then sent to the JGI for whole genome sequencing using the Illumina platform. Unfortunately, both … terrestrial fungi (i.e., zygomycetes), thanks to the sequencing effort by the JGI and ZyGoLife in recent years. …