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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… are active, and which microbes are eating what,  in the environment.  This distinction — between presence and … safely follow the path of that modified chemical in any environment. Organisms who process the modified compound will … and competition, illuminating the inner workings of an environment. For example, SIP experiments can show how soil …
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Triggering Morel Fruiting
… to seek other ways to make morels fruit under artificial environments, a technique to supply exogenous nutrients was … black morel to complete its lifecycle in an artificial environment. It is particularly helpful for studying … of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides …
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Building Wet and Dry Lab Skills
… by JGI, and used Jupyter notebook for a programming environment used to work inside of a programming language. For … Tamyra Long : JGI helped me see what working in this environment would feel like and look like. Watching you all do …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Tomas Tyml and Frederik Schulz, Eukaryotes in Extreme Environments Theo Loreaux and mentors Simon Roux and Frederik …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted a … of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides …
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A One-Stop Shop for Analyzing Algal Genomes
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… tended to weather pH stress from peatlands’ acidic environment more consistently, whereas male plants showed dramatic variation when under those same environmental stressors — with some thriving and others … how it responds to higher temperatures and a changing environment is vital to preserving peatlands in the face of a …
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Busting the Unbreakable Lignin
… their funding sources: Office of Biological and Environmental Research of the U.S. Department of Energy grant … grant MCB-1553721 (MAO), Office of Biological and Environmental Research of the U.S. Department of Energy Joint … National Laboratory), and the Office of Biological and Environmental Research of the U.S. Department of Energy Great …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… terpenes play key roles in plant growth, defense, and environmental interactions. Terpenes are also economically … number among the eucalypts, they inhabit different environments. Eucalyptus species prefer cooler, more temperate or sub-tropical environments, while Corymbia are more abundant in the drier …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates … of GenomeOcean supports the DOE Biological and Environmental Research program’s efforts to build predictive … 25-year study of microbial communities in freshwater environments, the long-term ecological Harvard Forest project, …
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Open Frameworks Training the Next Generation of Scientists
… and KBase are both supported by the DOE Biological and Environmental Research program.  KBase is a knowledge creation and discovery environment designed for reproducible computational biology … Starting with isolating and identifying fungi in the environment, students can prepare samples for sequencing and …
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JGI@25: The Little Alga That Could
… to enable great science that will help solve energy and environmental challenges. Chlamydomonas is a single-celled alga … a Harvard postdoc. While she had intended to work on cyanobacteria, fate stepped in when a fire at the lab relegated …
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