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Puerto Nuevo is a small town along the Baja California coastline in Mexico. While … Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the … Associated Microbes and Parasites. Ul-Hasan credits her JGI-UC Merced summer internship for helping lay the …

Researchers at the JGI develop a tool to quickly and accurately identify mobile … seek to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and … approach. The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 …

This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge National … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …

… the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone … year and continue working on their research project! The JGI-UC Merced internship program was founded in 2014 with …

… mix-and-match characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … for computational analysis of the AT enzyme family, the JGI provided DNA synthesis capabilities to enable functional …

New evidence shows anaerobic fungi can degrade the hardiest of … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential … at JBEI and analyzed by the GLBRC. By providing snapshots of the types of chemical bonds in plant cell walls, it …

… female gametes in one individual. But some, including shrub willow  Salix purpurea , employ the evolutionary strategy we … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. The JGI sequenced the shrub willows through the  Community …

… of the model plant  Marchantia polymorpha. Commonly known as liverwort, this was done to gain insights into gene families … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… of the genome sequence also provides insights into how the multiple chromosomes of  Miscanthus arose by ancient … and insights into the dynamics of gene expression as it grows back vigorously year after year (perenniality). The … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… of the genome sequence also provides insights into how the multiple chromosomes of Miscanthus arose by ancient … and insights into the dynamics of gene expression as it grows back vigorously year after year (perenniality). The … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, …

… role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user … implementation of advanced analysis pipelines and tools as well as development and implementation of microservices in …