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Draft genome sequences of Arthrobacter sp. AZCC_0090 and Mycobacterium sp. AZCC_0083 isolated from oligotrophic subsurface forest soil in the Santa Catalina mountains of Southern Arizona
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights … facilities that we worked with are cutting edge in terms of analysis and the fascinating results that we managed to … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Boosting Small Molecule Production in Super “Soup”
… still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … would be transformative at industrial scales. “Cell-free systems have been really powerful at finding ways to … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Viruses Reprogram Cells into Different Virocells
… from The Ohio State University and the University of Michigan studying how virus infections cause significant … infections can affect the interactions within their ecosystems. Summary Microbes drive the energy and nutrient … was done by the JGI, and proteomics and metabolomics analysis and microscopy at EMSL. The team infected the …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics … and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … external scientists, the Wang group has developed customized data analyses and software to enable “grand-scale” …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Katherine Louie
… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … spectrometry workflows for polar and nonpolar metabolite analysis, creation of large metabolite databases by running … diterpenoids impact the composition of the root-associated microbiome in maize (Zea mays). Scientific Reports. 2021. …
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JGI & KBase at PAG XXVII
… from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. … your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January 14, JGI Plant Program head Jeremy Schmutz and  KBase Co-PI Bob Cottingham host a  workshop on DOE …
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A Powerful Technique to Study Microbes, Now Easier
… help process experiments that measure microbial activity in soil. Now, the researchers and robots have made these …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … proteins. PhycoCosm’s built-in connection to the DOE Systems Biology Knowledgebase (KBase) also allows … microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing …
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