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Phylogeny, morphology, virulence, ecology, and host range of Ordospora pajunii (Ordosporidae), a microsporidian symbiont of Daphnia spp.
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A zinc-finger-family transcription factor, AbVf19, is required for the induction of a gene subset important for virulence in Alternaria brassicicola.
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying … in the collection, Genomics-enabled analysis of specialized metabolism in bioenergy crops: current progress and … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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Gene Expression: From On-Off Switch to Dial
Scientists have developed a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to … on, scientists can determine the level of gene expression by the gradations. The Impact Metabolic engineering could … in yeast ( Saccharomyces cerevisiae) to assess the potential of intermediate gene expression on two …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa … Additionally, 40 percent of the proposals were submitted by researchers who had not been a primary investigator on … our efforts to characterize poorly-studied algal and viral genomes, and integrate with key DOE Office of …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers … behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses … DNA, they can affect how microbes cycle nutrients and adapt to climate change. …
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A Powerful Technique to Study Microbes, Now Easier
… collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …
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Dan Rokhsar
Genome Institute in 2000 as the founding Associate Director for Computational Genomics, and led the computational … the origin, evolution, and diversity of plants and animals by combining computational genome analysis, sequence-based … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and … nutrients from that decay, and deliver those nutrients to tree roots and soil. These fungi help shape a forest’s … similar functions across different forests. Primary metabolism, cell activity, and fungal development looked …
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Virulence of banana wilt-causing fungal pathogen Fusarium oxysporum tropical race 4 is mediated by nitric oxide biosynthesis and accessory genes
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
Congratulations to Tanja Woyke, who has been awarded the van Niel … Systematics for the triennium 2017-2020! Established by the University of Queensland in 1986, the van Niel Prize … Woyke as a pioneer in uncovering the hidden diversity of “microbial dark matter”–that uncultured and unknown majority …
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The Soil Blooms Green
Every fall, a mysterious green growth appears on top of farmers’ fields: a microbial community that might be quietly improving the … researchers Mary Ann Bruns and Terry Bell are digging in to understand how. …
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