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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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Testing the kinetic tradeoff between bicarbonate versus phosphoenolpyruvate affinity and glucose-6 phosphate response of phosphoenolpyruvate carboxylase from two C4 grasses
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… Berkeley National Laboratory (Berkeley Lab) as well from across the globe via their laptops or even smartphones. … Jill Banfield approached Doudna with repeated genetic sequences (already known as CRISPR) that came up in her … within a species. A pangenome, then, consists of those sequences shared among all individuals in a given species as …
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Ian Blaby
… profiling of a synchronized diurnal transcriptome from Chlamydomonas reinhardtii reveals continuous cell and … al., Experimental evolution of a facultative thermophile from a mesophilic ancestor. Applied and environmental … Selected Publications …
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Nikos Kyrpides
… et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . 6(7):960-970. … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … ASM’s USFCC/J. Roger Porter Award (2018) Honorary Doctorate from the Aristotle University of Thessaloniki (2017) The van …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual … to be wildly divergent among sample sites. “Many of these sequences are no more similar than random,” Holmes said. … too divergent — but they’re there and you can use protein sequences to try and find them,” he explained. “…You train …
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The Power of One, Amplified
… single cell genomics by collecting nearly 500 single cells from a single low diversity hot spring sediment sample. … cycles and are potentially of use in fields ranging from agriculture to biotechnology and medicine, the vast … piecing each genome together from large mixtures of genomic sequences. A complementary approach to this is single cell …
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Sequencing the fungal tree of life
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Genome sequence of the palaeopolyploid soybean
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The trajectory of microbial single-cell sequencing
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ClaMS: A Classifier for Metagenomic Sequences
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Sphingomonas palmae sp. nov. and Sphingomonas gellani sp. nov., endophytically associated phyllosphere bacteria isolated from economically important crop plants
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