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Comparison of short-read and long-read metagenome assemblies in a natural soil community highlights systematic bias in recovery of high-diversity populations
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Doubling Down on Known Protein Families
… diversity of microbes through a novel approach to better understand microbial communities by looking at protein … Harnessing the collective power of more than 26,000 microbiome datasets, all accessible through the publicly … ‘Dark Matter’ Microbial communities living everywhere from soils and stomachs to the deep sea are capable of doing a …
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JGI@25: The Little Alga That Could
… (a third of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … genome is cited in roughly 10% of all since-released publications on green algae. “The Chlamy genome launched …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and their hitchhikers. The … onto a larger host — often, a fellow archaeal microbe. Understanding how these hosts and hitchhikers coexist is key … their impact on wider ecosystems, but these symbiotic interactions are difficult to study in the lab. Metagenomics …
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Phylogenomics reveals convergent evolution of red-violet coloration in land plants and the origins of the anthocyanin biosynthetic pathway
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De novo transcriptome assembly of drought tolerant CAM plants, Agave deserti and Agave tequilana
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Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave
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Prokaryotic viruses impact functional microorganisms in nutrient removal and carbon cycle in wastewater treatment plants
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Complete Genome Sequence of the Metabolically Versatile Plant Growth-Promoting Endophyte Variovorax paradoxus S110
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Phenotypic and genomic signatures of interspecies cooperation and conflict in naturally occurring isolates of a model plant symbiont
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Genetic mapping and prediction of flowering time and plant height in a maize Stiff Stalk MAGIC population
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Transposition of HOPPLA in siRNA-deficient plants suggests a limited effect of the environment on retrotransposon mobility in Brachypodium distachyon
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