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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program … Internship co-founder Axel Visel and UC Merced Quantitative Systems Biology professor Carolin Frank reflected on the … their perspectives and views” helped her further develop management and supporting skills for the students. Being …
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Introducing New Members of the JGI User Executive Committee
… “you-wren”) of the University of Arizona! They join nine other JGI users already serving on the UEC – go here … [public but use-restricted] exist on [the JGI data portal] IMG or how to deal with situations in which they … use-restricted data without contacting the lab that generated that data,” he said in his candidate statement. “I …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will bring together researchers across major ecosystems and disciplines who are developing and applying … these engineered ecosystems across various biological contexts. The program fosters intimate, dynamic …
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Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology … developing single-nuclei sequencing methods to characterize gene regulation at the level of individual cells across … BS in Biochemistry and Cell Biology, University of California, …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted … Interns Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran Madichetty and mentors TBK … and mentors Igor Grigoriev and Bishoy Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and … sugar polymers in macroalgae and developing the first microbial platform technologies unlocking the potential of …
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Accelerating Metagenomics Discoveries with Deep Learning
… Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 … rather than single cells or isolated strains, is easy to generate, but difficult to assemble and interpret. The … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying …
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Ecological generalism drives hyperdiversity of secondary metabolite gene clusters in xylarialean endophytes
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Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay
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Overexpression of a Prefoldin β subunit gene reduces biomass recalcitrance in the bioenergy crop Populus
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Phosphate transporters in marine phytoplankton and their viruses: cross‐domain commonalities in viral‐host gene exchanges
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