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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest … (Berkeley Lab). They were selected through peer review from 41 full proposals out of 50 letters of intent … in the Antarctic Peninsula. Additionally, the proposal from Viola Krukenberg at Montana State University …
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Ancient Algae Reveal Secrets of Plant Evolution
… the genes of land plants’ closest algal relative,  Zygnematophyceae , scientists have enhanced our understanding of how early plants transitioned from water to land. Key gene groups involved in stress … complex structures and adapt to changing environments — ultimately allowing them to adapt to life on land. Learning …
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The More the Merrier: Making the Case for Plant Pan-genomes
… abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two genome copies, one from each parent. Having three or more genome copies from … in a single reference genome is insufficient. “We really have to evaluate polyploid genomes in a pan-genomic …
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Genome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279T), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October … zero waste effort at the IGB. “Sustainable Berkeley Lab is really gearing towards getting us to zero waste …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… of the ongoing partnership between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two undergraduate students from UC Merced recently had summer internships in Walnut … CAMP students who earned outstanding research awards. From the 99 students who attended, representing 9 UC …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the … relatives with the BGCs, JGI scientists could relieve BGCs from their former genetic repression, enabling scientists to … doubling the amount of DNA that can be inserted at a time. In a  project detailed in  ACS Synthetic Biology , …
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Frederik Schulz
Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to find novel functions that may impact microbiome structure … University of Vienna (Austria) … Krinos et al. 2024. Time-series metagenomics reveals changing protistan ecology …
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Genome evolution in the allotetraploid frog Xenopus laevis
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The Genome of the Western Clawed Frog Xenopus tropicalis
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Trent Northen
… 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research Molecular Biologist at the … 2019 Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic …
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