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Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism
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Seven genome sequences of bacterial, environmental isolates from Pony Lake, Antarctica.
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Eight genome sequences of bacterial, environmental isolates from Canada Glacier, Antarctica
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Sequencing the Genomes of the First Terrestrial Fungal Lineages: What Have We Learned?
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Genome sequence of Nitrosopumilus adriaticus CCS1 assembled from an ammonia-oxidizing enrichment culture
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Eight genome sequences of bacterial environmental isolates from Marr Pond, Antarctica
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … The team set out to characterize the transcriptome – the complete set of RNA molecules transcribed from all the genes …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… first time, the sex chromosomes of shrub willow have been sequenced with sufficient resolution to analyze their … Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … sequencing to assemble the repetitive areas of the complete sex chromosomes. The results were published in  …
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Accelerating Metagenomics Discoveries with Deep Learning
… insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector … of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for … human chromosomes 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed …
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Whole community shotgun metagenomes of two biological soil crust types from the Mojave Desert
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Transcriptomic and genomic effects of gamma-radiation exposure on strains of the black yeast Exophiala dermatitidis evolved to display increased ionizing radiation resistance
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