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Introducing New Members of the JGI User Executive Committee
… new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa … in giving a voice to JGI users who feel that certain data sharing policies fail to represent the needs of large … Pawlowska, who studies fungal-bacterial symbiotic systems, noted that she would like to help advance JGI …
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JGI Hosts GPU Hackathon in May
… in graphical processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by the … is one of the largest producers of environmental genomics data and has a strong reputation in the community,” said JGI … sure our computational workload can leverage future HPC systems – our data and compute challenges aren’t getting any …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
More than 20 UC Merced students have contributed to the research of … the difficult early stages, so I can begin biological analysis of the data sooner than I anticipated.” In her message, Dumont …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to … them to be able to pull that water through the whole plant system, they need to open these pores in their leaves called … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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University of California, Merced Internship Program
… at the JGI, the Genomics Internship Program soon expanded to include undergraduate students. To date, more than 80 UC Merced students have contributed to the research of … them to:  Learn new skills. Experience industry-level work and coding. Receive mentorship, network and connect with Lab …
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2022 Progress Report
DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint … Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and … so now here at the JGI, I work with all of the sequencing data that the JGI produces to try to find and identify …
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Forming Scientific Connections and Building Community
… of Science User Facility, hosted three undergraduates and seven graduate students from UC Merced through their … months, the students participated in networking workshops, data carpentry hackathons, and also made new friends while … Project: “ Development of a multiplex genomic integration system for the selection of genes essential for specialized …
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Dispatches From JGI Interns
JGI-UC Merced Internship Program invites undergraduate and graduate students to engage in real, impactful research … their deep dives into genomics, computational tools, and big data.  …
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Fungus Fuels Tree Growth
… fungus  Mortierella elongata enjoys a dual lifestyle; it can thrive in the soil as a saprophyte, living off decaying organic matter, or as an endophyte, living between a plant’s … Advanced Research on the Biology of Tree and Forest Ecosystems (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI …
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Anna Ratner
Anna is working on the display and visualization of large omics data. …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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