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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint … and involves more than 17 research groups. The team set out to characterize the transcriptome – the complete set of RNA … their conversation has been lightly edited and condensed below.   Sarah Sharman:  What is the JGI Plant Gene Atlas? …
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User Executive Committee Charter
… and the annual user meeting. The UEC also acts as a liaison to the user community and the broader scientific community … UEC responsibilities include: Make recommendations to the JGI regarding calls for proposals, including focus … UEC members and will serve a one-year term in that role. Following this term, the Incoming Chair will transition to …
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Four Researchers Join JGI User Executive Committee
… Four researchers have been elected to the User Executive Committee of the Joint Genome … scientists and unconventional sample types such as low-biomass samples and host-associated holobionts. She is … worked closely with both the Fungal & Algal Program and the Microbial Program over the past decade in gene regulatory …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… link in the evolution and transition of fungi from aquatic to terrestrial habitats. The work is part of the JGI’s 1000 … genomic information for every family of fungi. In the following guest piece, JGI user Ying Chang in the Spatafora lab … known fossil record of land plants and evolved in early microbial biocrust environments.     …
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Trent Northen
… 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of … is the Metabolomics Science Program Head at the JGI. Click to learn more about the program's areas of focus, major …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research Molecular Biologist at the … as an experimental model for the grasses. In addition to this fundamental work, he established an efficient … distachyon is a small annual grass that is well suited to experimental manipulation in the laboratory because of …
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Building Wet and Dry Lab Skills
… the second year of Alabama A&M University students coming to the DOE Joint Genome Institute for research and training … interns Tamyra Long and Zyiah Mikes worked with mentors Yi Zhai and John Vogel from the Plant Functional … learn more about their experience? Watch the short video below:  Video Transcript: Zyiah Mikes : Hi. My name is Zyiah …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a changing planet. Transcript for Audio   … leaf for photosynthesis.  ALISON:  Photosynthesis is what allows plants to make their own food from light and air — in …
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Forming Scientific Connections and Building Community
… on their summer projects. Watch the short video here to see what they had to say about their experiences and what … with them as they go forward in their careers.   Listed below are the interns, their mentors, and their summer … W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein Bendall : “It’s great …
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JGI-UC Merced Interns Share Their 2021 Experiences
… UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science … narratives, videos, a podcast episode, and presentations below. … Evolution of the Mitochondria Internship … Cross Species Integration of Single Cell Transcriptomes …
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JGI@25: Strengthening Soybean
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … challenges. Maximizing soybean yield is critical to energy independence in the U.S. Not only does it pair … it simply doesn’t yield enough gallons of fuel per acre to compete with gasoline. Yet.  In 2010, soybean became the …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… more about what they learned from working with their JGI mentors, what challenges they overcame, and what new skill sets they look forward to taking back to school.  The interns from this cohort and their …
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