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SPRUCE-ing Up Science
… soon, and he’s looking forward to presenting on these findings and the larger implications of the work. In … time on the graphics that will help to represent their findings. “The graphics, they’re essentially distilling …
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Draft genome and description of Consotaella salsifontis gen. nov. sp. nov., a halophilic, free-living, nitrogen-fixing alphaproteobacterium isolated from an ancient terrestrial saline spring
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Arboriscoccus pini gen. nov., sp. nov., an endophyte from a pine tree of the class Alphaproteobacteria, emended description of Geminicoccus roseus, and proposal of Geminicoccaceae fam. nov.
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When “The Blob” Made It Hotter Under the Water
… flux in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral fellow … up and down the water column. They recently shared their findings in Communications Biology . They reported that the …
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Marianne Buscaglia
… in cold marine environments and is interested in analyzing genes that can impact the metabolism of their hosts. …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes from … their genomes. The Impact Despite great strides in generating genome sequences for members of the microbial … (metagenomics) and single-cell genomics, the vast majority of microbes that play key roles in global …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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JGI-UC Merced Interns Share Their 2021 Experiences
Clustering Scalable … Cataloging Lineage Specific Conserved Genes in Giant Viruses … Pan-genome Graphs: Approaches for …
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An Automated Tool for Assessing Virus Data Quality
… perform functional assessment, host prediction, and phylogenetic analysis. The development of CheckV helps … these sequences may be tainted by the presence of non-viral genes. Up to this point, there has been a lack of fast and … across both datasets, separating these from the vast majority of other sequences that were incomplete fragments. …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
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Exploring the Diversity of the American Prairie’s Switchgrass
… traits — height, biomass, hardiness to cold, etc. — to its genes. The undertaking took shovels, trucks — and more than …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… contains about 6% of the human genome . They discovered genes linked to conditions such as cardiovascular disease, … about 2% of the human genome. They were interested in genes involved in repair of DNA damage, and those associated … 3% of the human genome. They wanted to learn about the genes implicated in the development of breast and prostate …
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