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… data sets of RNA sequences (metatranscriptomes) generated from diverse environmental samples around the world, … unlikely to contain the RdRP sequence. The work resulted from a three-way collaboration that began in 2019, recalled … working on mining prokaryotic viruses together, learned from JGI’s Nikos Kyrpides that his Microbiome Data Science …

This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the … were two undergraduate students and two graduate students from UC Merced. Cristhian Gutierrez and Bryan Rangel Alvarez …

… in an unexpected place: hot spring-dwelling bacteria from the phylum C hloroflexota . Research shows that … They were part of an ancient lineage of bacteria to migrate from oceans and colonize land. Terrestrial  Chloroflexota … extremes, where both temperatures and pH levels vary wildly from spring to spring. These biodiversity hotspots harbor …

… papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State …

… later on in the spring. In this episode, hear proposal tips from Tanja Woyke, who runs user programs at the JGI, and …

… years. The DOE brought together the people and resources from these three national labs to form the DOE Joint Genome …

… proposals for state-of-the-art functional genomics research from potential users who need help translating genomic …

This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at …

… techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in support …

… genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome …

… other technological advancements that facilitate the shift from uncovering microbial novelties to deciphering metabolic … to assign functional “read out” to sequence data. Moving from cataloging microbial diversity to experimental …

… it’s possible that fungal communities — or enzymes from fungal communities — could pave the way for many … But there’s opportunities for borrowing and porting parts from nature — enzymes, transporters, pathways — into …