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Gone with a trace: cataloguing the disappearing gut microbes
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Genetic dissection of interspecific differences in yeast thermotolerance
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Ray Turner Completes Last Tour of Lab Duty at JGI
Area, the successful recruitment of a new JGI Director, and towards the strategic co-localization of JGI and KBase at … Institute and Deputy for Operations Biological Systems & Engineering Division. “I feel so lucky that I get to have … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting … the data had driven his lab’s focus on guide RNA library generation and development and its applications. “I moved to … The consortium looked at how different bioenergy relevant plants can produce species-specific blends of terpenoids, …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of fungi by James et al. and Sekimoto et al . …
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Evolutionary instability of CUG-Leu in the genetic code of budding yeasts
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome … Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the genetic cause of a rare form of human epilepsy and …
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements … isolating individual bacterial cells and amplifying their genetic material, thus bypassing the need to culture these … stages of the arbuscular mycorrhizal symbiosis. Nature Plants 10, 673–688 Vyshenska et al. 2023. A standardized …
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You Can Move, But You Can’t Hide
… develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic entities that seek to … forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint … genomes, they found a huge variety of CRISPR-Cas systems. Generally, prokaryotes use CRISPR-Cas systems to recognize …
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A chromosome-scale genome assembly and dense genetic map for Xenopus tropicalis
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Brachypodium distachyon and Setaria viridis: Model Genetic Systems for the Grasses.
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