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A Powerful Technique to Study Microbes, Now Easier
Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that … researchers and robots have made these experiments easier for scientists everywhere. …
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Antonio Camargo
Antonio’s research is focusing on the development of new methods for the identification and classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …
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Uri Neri
Uri Neri is a computational biologist who spends his days wrangling … remembering to document his code. At JGI, he develops tools for viral discovery and analysis, with a particular fondness for RNA viruses – …
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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their ever-changing environments … are from narrow swaths of the plant tree of life. One project aims to change that. …
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The Power of One, Amplified
A preview of how large-scale single cell genomics … of microbial genomes directly from environmental sequence data, by piecing each genome together from large mixtures of … represented by enough single cell genomes to facilitate an analysis of within and between population heterogeneity by …
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Krishna Palaniappan
Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic …
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Lake Mendota sits right next to the University of Wisconsin, … McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater … they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 … tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef … yeast’s native chromosomes with synthetic versions. This project has turned out to be an international collaboration, … the way. Eventually, the goal is to create an entirely human-generated yeast genome. …
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy … Communications , two research teams joined forces and data sets to describe bacterial genomes for related … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Metagenomic Insights into the Uncultured Diversity and Physiology of Microbes in Four Hypersaline Soda Lake Brines
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