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High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi … The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope probing (SIP) …

Congratulations to the proposers of the 19 proposals selected for the 2023 Community Science … Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … This year’s annual CSP call had five areas of emphasis: genes to function, plant and algal functional genomics, …

Successful Community Science Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  … and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …

New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called …

JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, including …

Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are … (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics … carbon captured from the atmosphere in a process that generates energy. The MPI team ultimately aims to develop an …

… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … conditions. They identified 511 new or recently discovered genera of bacteria and archaea. Many of the samples shared a … and metabolic potential of the communities studied. The datasets are available on the JGI’s  Integrated Microbial …

Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … — cupids of the plant world facilitating the remixing of genes in the next generation of flowering vegetation. In … One other finding that interested the authors was that an evolutionary analysis of  Bifidobacterium strains in honey …

Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of … . Camargo A. et al. 2023. Identification of mobile genetic elements with geNomad. Nature Biotechnology . Schulz … academic achievements (2008) … Education … Selected Publications … Awards and Service …

… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … Opioid Epidemic: Determining the Epistatic and Pleiotropic Genetic Architectures for Chronic Pain and Opioid … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …

Since joining the DOE Joint Genome Institute in 2016, Dr. … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … which metabolites. … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …

… and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … include large-scale genome variants analyses, next-generation transcriptome de novo assembly, metagenome and … metagenome binning software … Education … Selected Publications … Software …