CoverM: Read alignment statistics for metagenomics.
Results
PSimScan: Algorithm and Utility for Fast Protein Similarity Search
Strategic Integration of Multiple Bioinformatics Resources for System Level Analysis of Biological Networks
Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and
Impact of library preparation protocols and template quantity on the metagenomic reconstruction of a mock microbial community
Development of PCR-based markers for the identification and detection of Lophodermella needle cast pathogens on Pinus contorta var. latifolia and P. flexilis
Building a custom high-throughput platform at the Joint Genome Institute for DNA construct design and assembly-present and future challenges.
ALE: a generic assembly likelihood evaluation framework for assessing the accuracy of genome and metagenome assemblies
Whole-Genome Sequencing Identifies a Rice Grain Shape Mutant, gs9–1
Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
Metabolic characterization of anaerobic fungi provides a path forward for bioprocessing of crude lignocellulose
A single-cell genomics pipeline for environmental microbial eukaryotes
