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Transposon Mutagenesis Paired with Deep Sequencing of Caulobacter crescentus under Uranium Stress Reveals Genes Essential for Detoxification and Stress Tolerance
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JGI-UC Merced Interns Share Their 2021 Experiences
Phages … Polymorphisms Created by Transposable Elements … Evolution of the Mitochondria Internship … Cross Species … Impact on Microbial Root … Cross Species Comparison of Plant Single-cell Transcriptomes of Rice and Arabidopsis … Clustering Scalable … Cataloging Lineage Specific Conserved Genes in Giant Viruses … Pan-genome Graphs: Approaches for …
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The Genome of Polaromonas sp. Strain JS666: Insights into the Evolution of a Hydrocarbon- and Xenobiotic-Degrading Bacterium, and Features of Relevance to Biotechnology▿ †
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Characterisation and comparative analysis of mitochondrial genomes of false, yellow, black and blushing morels provide insights on their structure and evolution
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The GC-Rich Mitochondrial and Plastid Genomes of the Green Alga Coccomyxa Give Insight into the Evolution of Organelle DNA Nucleotide Landscape
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Restoration of biofuel production levels and increased tolerance under ionic liquid stress is enabled by a mutation in the essential Escherichia coli gene cydC
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A sorghum genome-wide association study (GWAS) identifies a WRKY transcription factor as a candidate gene underlying sugarcane aphid (Melanaphis sacchari) resistance
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Three Join the JGI User Executive Committee
… influence biogeochemical cycles in soils and sediments and plant-microbial interactions in crops. He has been a PI or … is an Assistant Professor in the Department of Ecology, Evolution and Marine Biology at UCSB, where she leads a research group investigating the physiology and evolution of marine aggregates and biofilms. She credits the …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms … methods; shotgun metagenomic sequencing and single-cell sequencing. For years, extracting single cells and then amplifying their DNA for genome sequencing …
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JGI Early Career Researchers Featured in mSystems Special Issue
… metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools before sequencing to recover … to link mobile elements such as plasmids to microbial host cells. In a separate article, research scientist Simon Roux, …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… will be competitive. Q:  Can you elaborate on the single-cell genomics capabilities? A:  EMSL’s capabilities include laser capture microdissection, single cell sorting and nanoPOTs. The JGI’s single cell capabilities range from traditional single cell …
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