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… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … by weeks of tricky, laborious lab work to analyze samples from one experiment. Starting a  few years ago, researchers … Pacific Northwest National Laboratory, Northern Arizona University, Argonne National Laboratory and the JGI.  With …

… annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new … our understanding of fungal diversity by sequencing genomes from across the fungal Tree of Life, but they also highlight … 2018, in Nature Genetics , a team led by researchers at the University of California, Berkeley and the Buck Institute …

… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National User Facilities into their … The ranked proposal list, along with a recommendation from management at JGI and the other participating … as needed), and the work plan is written into a Statement of Work document. …

… than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … Wang and Science Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi from the School of Natural Sciences and started a program …

… for researchers to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry … challenges in the sourcing, recovery, and utilization of critical minerals and materials. For accepted proposals, … will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user …

… start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … and poplar, a team led by Hui-Ling (Sunny) Liao of the University of Florida collected forest samples of poplar and soil from Washington and Oregon. The cuttings included genotypes …

… processes for the first time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as … data set will help identify how different elements of the ecosystem interact and respond to changes in the … Summary The 27 samples studied by researchers came from two environments: natural forests and plantations …

… A nuanced understanding of peat moss drives insight into carbon storage   The … soil carbon. The process to harvest energy-generating peat from these boggy wetlands produces an estimated 5% of annual … sphagnum  genomes from plants selected by a team from Duke University, then tested for heat and pH stress by Oak Ridge …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … miles and eight states. In 2021, using switchgrass samples from these gardens, a team led by researchers at the University of Texas at Austin produced a high-quality …

… genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … all fungi, and found that some of these genes have moved from the mitochondria into the nuclear genome over … public databases and recovered more than 3,000 others from environmental datasets. All of the annotations and data …

… characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … of this work.  Han is an Assistant Professor at Konkuk University in South Korea as well as a faculty affiliate in … found that these enzymes have evolved distinctly from both core and specialized enzymes. Even during …

… SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to … This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few different ways they're working to … more reusable, and more insightful, for the future of studying microbial communities.   …