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… peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants …

… work, but the opportunity to collaborate with and learn from fellow researchers onsite as well. …

JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal … are more broadly applicable to the download processes from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a …

… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … class  Dothideomycetes includes fungi that obtain nutrients from decaying organic matter (saprobes), and many plant … predicting plant pathogens (blue) vs saprobes (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using …

In a special issue of mSystems , out May 14, 2019, JGI researchers are among … specific metabolic processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on sequence reads to link …

Over the course of eight weeks this past summer, 10 students from UC Merced … The topics students worked on ranged far and wide — from implementing new data visualization tools, to using …

… and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …

… a close as this previously retired Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has … a close as this previously retired Naval Commander retires from Berkeley Lab. On June 24, in what was billed as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – …

… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … it is the largest repository of BGC sequence data from over 1.3 million publicly available bacterial and … gene clusters and secondary metabolites information from isolate and metagenome data.   The SMC ( …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … The JGI updates its Sorghum bicolor reference genome and releases it to the community. 2014: GENCODE project begins. …

A new view into a symbiosis could offer benefits to address climate change: pulling … as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging … this symbiosis could improve the way soils store carbon from the atmosphere. For plants, boosting this relationship …

A new view into a symbiosis could offer benefits to address climate change: pulling … as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging … this symbiosis could improve the way soils store carbon from the atmosphere. For plants, boosting this relationship …